Publications

Books

  • T. Krüger, H. Kusumaatmaja, A. Kuzmin, O. Shardt, G. Silva, E.M. Viggen. The Lattice Boltzmann Method – Principles and Practice. Springer, 2016. ISBN 978-3319446479. Springer, Amazon
  • M. Bartelmann, B. Feuerbacher, T. Krüger, D. Lüst, A. Rebhan, A. Wipf. Theoretische Physik. Springer Spektrum, 2014. ISBN 978-3642546174. Springer, Amazon

Book chapters

  • P.R. Hoskins,‎ S.F. Keevil (Editors). Academic Practice – A Handbook for Physicists and Engineers involved in Biomedical Research and Teaching. Institute of Physics and Engineering in Medicine, 2017. ISBN 978-1903613634. IPEM, Amazon

Submitted articles

  • A. Hochstetter, R. Vernekar, R. Austin, H. Becker, J. Beech, D. Fedosov, G. Gompper, S.-C. Kim, J. Smith, G. Stolovitzky, J. Tegenfeldt, B. Wunsch, K.K. Zeming, T. Krüger, D. Inglis. Deterministic Lateral Displacement – Challenges and Perspectives.
  • S. Fallah-Kharmiania, M.J. Sayyaria, T. Krüger, H. Niazmand. Application of a modified pseudo-potential lattice-Boltzmann method to three-dimensional simulation of realistic multi-phase flows.
  • Q. Zhou, T. Perovic, I. Fechner, L.T. Edgar, P.R. Hoskins, H. Gerhardt, T. Krüger, M.O. Bernabeu. Association between erythrocyte dynamics and vessel remodelling in developmental vascular networks. bioRxiv
  • K.K. Zeming, R. Vernekar, M.T. Chua, K.Y. Quek, G. Sutton, T. Krüger, W.S. Kuan, J. Han. Stratification of sepsis patients using rapid leukocyte biophysical assay on a single blood drop.
  • M. Pepona, A. Shek, C. Semprebon, T. Krüger, H. Kusumaatmaja. Modelling ternary fluids in contact with elastic membranes. arXiv
  • M.O. Bernabeu, J. Kory, J.A. Grogan, B. Markelc, A.B. Ricol, M. d’Avezac, J. Kaeppler, N. Daly, J. Hetherington, T. Krüger, P.K. Maini, J.M. Pitt-Francis, R.J. Muschel, T. Alarcon, H.M. Byrne. Abnormal morphology biases haematocrit distribution in tumour vasculature and contributes to heterogeneity in tissue oxygenation. bioRxiv

Journal articles

  1. E. Guzniczak, T. Krüger, H. Bridle, M. Jimenez. Limitation of spiral microchannels for small particle separation in heterogeneous mixtures: impact of particles’ size and deformability. Biomicrofluidics (in press)
  2. Q. Zhou, J. Fidalgo, L. Calvi, M.O. Bernabeu, P.R. Hoskins, M.S.N. Oliveira, T. Krüger. Spatiotemporal Dynamics of Dilute Red Blood Cell Suspensions in Low-Inertia Microchannel Flow. Biophys. J. 118, 2561-2573 (2020). arXiv, ScienceDirect
  3. D.W. Inglis, R. Vernekar, T. Krüger, S. Feng. The fluidic resistance of an array of obstacles and a method for improving boundaries for Deterministic Lateral Displacement arrays. Microfluidics Nanofluidics 24, 18 (2020). Springer Link
  4. S.R. Bazaz, A. Mashhadian, A. Ehsani, S. Saha, T. Krüger, M.E. Warkiani. Computational Inertial Microfluidics: A Review. Lab Chip 20, 1023-1048 (2020). Lab Chip
  5. H. Wang, T. Krüger, F. Varnik. Effects of size and elasticity on the relation between flow velocity and wall shear stress in side-wall aneurysms: A lattice Boltzmann-based computer simulation study. PLoS ONE 15, e0227770 (2020). bioRxiv, PLoS
  6. M. Wouters, O. Aouane, T. Krüger, J. Harting. Mesoscale simulation of soft particles with tunable contact angle in multi-component fluids. Phys. Rev. E 100, 033309 (2019). arXiv, PRE
  7. U.D. Schiller, T. Krüger, O. Henrich. Mesoscopic Modelling and Simulation of Soft Matter. Soft Matter 14, 9-26 (2018). arXiv, Soft Matter
  8. R. Vernekar, T. Krüger, K. Loutherback, K. Morton, D. Inglis. Anisotropic permeability in deterministic lateral displacement arrays. Lab Chip 17, 3318 (2017). arXiv, Lab Chip
  9. S. Schmieschek, L. Shamardin, S. Frijters, T. Krüger, U.D. Schiller, J. Harting, P.V. Coveney. LB3D: A Parallel Implementation of the Lattice-Boltzmann Method for Simulation of Interacting Amphiphilic Fluids. Comput. Phys. Comm. 217, 149 (2017). ScienceDirect
  10. J. Pande, L. Merchant, T. Krüger, J. Harting, A.-S. Smith. Effect of body deformability on microswimming. Soft Matter 13, 3984 (2017). arXiv, Soft Matter
  11. J. Pande, L. Merchant, T. Krüger, J. Harting, A.-S. Smith. Setting the pace of microswimmers: when increasing viscosity speeds up self-propulsion. New J. Phys. 19, 053024 (2017). arXiv, IOP
  12. T. Krüger. Effect of tube diameter and capillary number on platelet margination and near-wall dynamics. Rheol. Acta 55, 511-526 (2016). arXiv, Springer Link
  13. C. Semprebon, T. Krüger, H. Kusumaatmaja. Ternary Free Energy Lattice Boltzmann Model with Tunable Surface Tensions and Contact Angles. Phys. Rev. E 93, 033305 (2016). arXiv, PRE
  14. R. Vernekar, T. Krüger. Breakdown of deterministic lateral displacement efficiency for non-dilute suspensions: a numerical study. Med. Eng. Phys. 37, 845-854 (2015). arXiv, ScienceDirect
  15. S. Frijters, T. Krüger, J. Harting. Parallelised Hoshen-Kopelman algorithm for lattice-Boltzmann simulations. Comput. Phys. Commun. 189, 92-98 (2015). arXiv, ScienceDirect
  16. M. Gross, T. Krüger, F. Varnik. Fluctuations and diffusion in athermal suspensions of deformable particles. Europhys. Lett. 108, 68006 (2015). arXiv, EPL
  17. G.B. Davies, T. Krüger, P.V. Coveney, J. Harting. Detachment Energies of Spheroidal Particles from Fluid-Fluid Interfaces. J. Chem. Phys. 141, 154902 (2014). arXiv, JCP
  18. G.B. Davies, T. Krüger, P.V. Coveney, J. Harting, F. Bresme. Assembling Ellipsoidal Particles at Fluid Interfaces using Switchable Dipolar Capillary Interactions. Adv. Mater. 26, 6800 (2014). arXiv, Advanced Materials
  19. T. Krüger, D. Holmes, P.V. Coveney. Deformability-based red blood cell separation in deterministic lateral displacement devices – a simulation study. Biomicrofluidics 8, 054114 (2014). arXiv, Biomicrofluidics
  20. G.B. Davies, T. Krüger, P.V. Coveney, J. Harting, F. Bresme. Interface deformations affect the orientation transition of magnetic ellipsoidal particles adsorbed at fluid-fluid interfaces. Soft Matter 10, 6742 (2014). arXiv, Soft Matter
  21. M.O. Bernabeu, M.L. Jones, J.H. Nielsen, T. Krüger, R.W. Nash, D. Groen, S. Schmieschek, J. Hetherington, H. Gerhardt, C.A. Franco, P.V. Coveney. Computer simulations reveal complex distribution of haemodynamic forces in a mouse retina model of angiogenesis. J. R. Soc. Interface 11, 20140543 (2014). arXiv, Interface
  22. T. Krüger, B. Kaoui, J. Harting. Interplay of inertia and deformability on rheological properties of a suspension of capsules. J. Fluid Mech. 751, 725-745 (2014). arXiv, JFM
    Focus on Fluids: C. Misbah. Soft suspensions: inertia cooperates with flexibility. J. Fluid Mech. 760, 1-4 (2014). JFM
  23. M. Gross, T. Krüger, F. Varnik. Rheology of dense suspensions of elastic capsules: normal stresses, yield stress, jamming and confinement effects. Soft Matter 10, 4360 (2014). arXiv, Soft Matter
  24. R.W. Nash, H.B. Carver, M.O. Bernabeu, J. Hetherington, D. Groen, T. Krüger, P.V. Coveney. Choice of boundary condition for lattice-Boltzmann simulation of moderate Reynolds number flow in complex domains. Phys. Rev. E 89, 023303 (2014). arXiv, PRE
  25. T. Krüger, M. Gross, D. Raabe, F. Varnik. Crossover from tumbling to tank-treading-like motion in dense simulated suspensions of red blood cells. Soft Matter 9, 9008 (2013). arXiv, Soft Matter
  26. T. Krüger, S. Frijters, F. Günther, B. Kaoui, J. Harting. Numerical simulations of complex fluid-fluid interface dynamics. Eur. Phys. J. 222, 177 (2013). arXiv, Springer Link
  27. B. Kaoui, T. Krüger, J. Harting. Complex dynamics of a bilamellar vesicle as a simple model for leukocytes. Soft Matter 9, 8057 (2013). arXiv, Soft Matter
  28. M.O. Bernabeu, R.W. Nash, D. Groen, H.B. Carver, J. Hetherington, T. Krüger, P.V. Coveney. Impact of blood rheology on wall shear stress in a model of the middle cerebral artery. Interface Focus 3, 20120087 (2013). arXiv, Royal Society
  29. B. Kaoui, T. Krüger, J. Harting. How does confinement affect the dynamics of viscous vesicles and red blood cells? Soft Matter 8, 9246 (2012). arXiv, Soft Matter
  30. T. Krüger, F. Varnik, D. Raabe. Efficient and accurate simulations of deformable particles immersed in a fluid using a combined immersed boundary lattice Boltzmann finite element method. Comput. Math. Appl. 61, 3485 (2011). arXiv, ScienceDirect
  31. T. Krüger, F. Varnik, D. Raabe. Particle stress in suspensions of soft objects. Philos. T. Roy. Soc. A 369, 2414 (2011). RSTA
  32. T. Krüger, F. Varnik, D. Raabe. Second-order convergence of the deviatoric stress tensor in the standard Bhatnagar-Gross-Krook lattice Boltzmann method. Phys. Rev. E 82, 025701(R) (2010). PRE
  33. M.A. Fallah, V.M. Myles, T. Krüger, K. Sritharan, A. Wixforth, F. Varnik, S.W. Schneider, M.F. Schneider. Acoustic driven flow and lattice Boltzmann simulations to study cell adhesion in biofunctionalized microfluidic channels with complex geometry. Biomicrofluidics 4, 024106 (2010). Biomicrofluidics
  34. T. Krüger, F. Varnik, D. Raabe. Shear stress in lattice Boltzmann simulations. Phys. Rev. E 79, 046704 (2009). arXiv, PRE
  35. T. Krüger, M. Neubert, C. Wetterich. Cosmon lumps and horizonless black holes. Phys. Lett. B 663, 21 (2008). arXiv, ScienceDirect

Proceedings papers

  1. T. Krüger, D. Holmes, P.V. Coveney. Deformability of red blood cells affects their velocity in deterministic lateral displacement devices. 4th Micro and Nano Flows Conference 2014
  2. G. Matura, A. Basermann, F. Chen, M. Flatken, A. Gerndt, J. Hetherington, T. Krüger, R. Nash. A Pre-Processing Interface for Steering Exascale Simulations by Intermediate Result Analysis through In-Situ Post-Processing. HPCN-Workshop 2013
  3. F. Chen, M. Flatken, A. Basermann, A. Gerndt, J. Hetherington, T. Krüger, G. Matura, R. Nash. Enabling in situ pre- and post-processing for exascale hemodynamic simulations. Supercomputing 2012 – Workshop: Preparing Applications for Exascale Through Co-design
  4. J. Harting, F. Janoschek, B. Kaoui, T. Krüger, F. Toschi. Simplified models for coarse-grained hemodynamics simulations. Proceedings of the 3rd European Conference on Microfluidics (Microfluidics 2012)

PhD thesis

  • T. Krüger. Computer Simulation Study of Collective Phenomena in Dense Suspensions of Red Blood Cells under Shear. Wiesbaden: Springer Spektrum, 2012. ISBN 978-3834823755. Springer